Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMPTDAKRPLQLNDQGQLRHFISLDGLPRELLTEILDTADSFLEVGARAVKKVPLLRGKTVCNVFFENSTRTRTTFELAAQRLSADVISLNV-STSSTSKGETLTDTLRNLEAMAADMFVVRHSDSGAAHFIAEHVSPNVAVINGGDGRHAHPTQGMLDMLTIRRHKGNFEQLSVAIVGDILHSRVARSNMLALKTLGCPDIRVIAPRTLLPI-GLEEQY---G--VRVFTNADEGLKDVDVVIMLRLQRERMQGGLLPSEGEFFKLYGLTEKRLKLAKPDAIVMHPGPINRGVEIESAVADGAQSVILNQVTYGIAIRMAVLSMAMSGQNTQRQLEQEDAE
1ML4 Chain:A ((2-307))-------------DWKGRDVISIRDFSKEDIETVLATAERLERELKE-KGQLEYAKGKILATLFFEPSTRTRLSFESAMHRLGGAVIGFAEASTSSVKKGESLRDTIKTVEQY-CDVIVIRHPKEGAARLAAEVA--EVPVINAGDGSNQHPTQTLLDLYTIKKEFGRIDGLKIGLLGDLKYGRTVHSLAEALTFYDV-ELYLISPELLRMPRHIVEELREKGMKVVETTTLEDVIGKLDVLYVTRIQKERFPDEQ--EYLKVKGSYQVNLKVLEKAKDELRIMHPLPR--VDEIHPEVDNTKHAIYFRQVFNGVPVRMALLALVLGVI------------


General information:
TITO was launched using:
RESULT:

Template: 1ML4.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -240368 for 2593 contacts (-92.7/contact) +
2D Compatibility (PS) -33232 + (NN) -15595 + (LL) 1568
1D Compatibility (HY) -20400 + (ID) 4950
Total energy: -312977.0 ( -120.70 by residue)
QMean score : 0.556

(partial model without unconserved sides chains):
PDB file : Tito_1ML4.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-1ML4-query.scw
PDB file : Tito_Scwrl_1ML4.pdb: