Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MIKLHTNHGVITLKLDEEKAPETAANFKEYVKSGH---YDNTVFHRVINNFMIQGGGFEPG-MKQK-PTR-APIKNEANNGLTNKVGSIAMARTMDPHSASAQFFINVADNDFLNHTAPTTQGWGYAVFGEVVEGMDVVNKIKGVATTMRSGHQDVPAEDVIIEKAEIVEE
2HAQ Chain:A ((37-187))
----SEPLGRITIGLFGKDAPLTTENFRQLCTGEHGFGYKDSIFHRVIQNFMIQGGDFTNFDGTGGKSIYGEKFADENL-NVKHFVGALSMA-NAGPNTNGSQFFITTAPTPWLDGRH--------VVFGKVLDGMDVVLRIEKTKTNSH----DRPVKPVKIVASGEL--
General information:
TITO was launched using:
RESULT:
Template:
2HAQ.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -36352 for 1081 contacts (-33.6/contact) +
2D Compatibility (PS) -15037 + (NN) -4338 + (LL) 832
1D Compatibility (HY) -10800 + (ID) 2550
Total energy: -68245.0 ( -63.13 by residue)
QMean score : 0.563
(partial model without unconserved sides chains):
PDB file :
Tito_2HAQ.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2HAQ-query.scw
PDB file :
Tito_Scwrl_2HAQ.pdb
: