Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MQLKDKVIIITGGCQGLGRAMGEYLAGKGARLALVDLNRERLDEAVAACKAAGGDARAYVCNVADEEQVTHMVAQVASDFG-AINGLVNNAGILRDGLTIKVKDGQLSKMSLAQWQSVIDVNLTGVFLCTREVAAKMIELKNEGAIVNISSI-SRAGNMGQANYSAAKAGVAADTVVWAKELARYGIRVAGVAPGFIETEMTAGMKPEALEKMTAGIPLKRMGKPVEIAHSVAYIFEND--YYTGRVLELDGGLRL |
| 2PD6 Chain:D ((4-255)) | -RLRSALALVTGAGSGIGRAVSVRLAGEGATVAACDLDRAAAQETVRLL-----NHAAFQADVSEARAARCLLEQVQACFSRPPSVVVSCAGITQDEF--------LLHMSEDDWDKVIAVNLKGTFLVTQAAAQALVSNGCRGSIINISSIVGKVGNVGQTNYAASKAGVIGLTQTAARELGRHGIRCNSVLPGFIATPMTQKVPQKVVDKITEMIPMGHLGDPEDVADVVAFLASEDSGYITGTSVEVTGGL-- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2PD6.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -144311 for 2079 contacts (-69.4/contact) +
2D Compatibility (PS) -25464 + (NN) -5085 + (LL) 940
1D Compatibility (HY) -16800 + (ID) 4650
Total energy: -195370.0 ( -93.97 by residue)
QMean score : 0.566
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