Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MSELNLTTDEARVSYGIGRQLGDQLRENPVPGMTLDAVLAGLSDAFAGIDSRVSGEALSASFQVIRERMQAEA--QAKAEAAAGEGRAYLAENAKREGVTVLPSGLQFEVLSTGEGAKPSREDTVRTHYHGTLIDGTVFDSSYQRGQPAEFPVGGVIAGWVEALQLMNAGSKWRLHVPSELAYGGQAV-GSIPPHSVLVFDVELLEIL
3OE2 Chain:A ((87-218))
-------------------------------------------------------------------------GTDAPTEAALKAERTFMAGEKAKPGVKELADGILMTELTPGTGPKPDANGRVEVRYVGRLPDGKIFDQST---QPQWFRLDSVISGWTSALQNMPTGAKWRLVIPSDQAYGAEGAGDLIDPFTPLVFEIELIAVS
General information:
TITO was launched using:
RESULT:
Template:
3OE2.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -58747 for 963 contacts (-61.0/contact) +
2D Compatibility (PS) -14159 + (NN) -4308 + (LL) 4944
1D Compatibility (HY) -8400 + (ID) 2600
Total energy: -83270.0 ( -86.47 by residue)
QMean score : 0.537
(partial model without unconserved sides chains):
PDB file :
Tito_3OE2.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3OE2-query.scw
PDB file :
Tito_Scwrl_3OE2.pdb
: