Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MSKGHSLQDPYLNTLRKERVPVSIYLVNGIKLQGQIESFDQFVILLKNTVSQMVYKHAISTVVPSRPVRLPSGDQPAEPGNA
3RER Chain:C ((2-65))
-AKGQSLQDPFLNALRRERVPVSIYLVNGIKLQGQIESFDQFVILLKNTVSQMVYKHAISTVVPS-----------------
General information:
TITO was launched using:
RESULT:
Template:
3RER.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -44924 for 394 contacts (-114.0/contact) +
2D Compatibility (PS) -6990 + (NN) -724 + (LL) 200
1D Compatibility (HY) -10400 + (ID) 2950
Total energy: -65788.0 ( -166.97 by residue)
QMean score : 0.493
(partial model without unconserved sides chains):
PDB file :
Tito_3RER.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3RER-query.scw
PDB file :
Tito_Scwrl_3RER.pdb
: