Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MNHRIALNFEDGVTRFIHAAPGETVADAAYRQGINIPLDCRDGACGTCKCLAEAGRYALGQDYIDDALSAEEAARGYVLTCQMRAESDCVLRVPASSTLCRTGQARYEARISEVRQLSPS-----TIGLSLRGEALASLAFLPGQYVNLQVPGS------EQRRAYSFSSLAK-----DGEVSFLIRNVP----------GGLMSGFLSGTARAGDSLAMDGPLGSFYLRE--IHRPLLMLAGGTGLAPFTAMLERIAEQG---------SAHPLHLVYGVTHDVDLVGLERLEAFAERIP-GFTWSACVASADSDY-PRKGYVTEHIAAQH------LHEGDVDIYLCGPPPMVEAVERYLREQGVRPANFYYEKFAASAA |
| 2BMW Chain:A ((20-289)) | --------------------------------------------------------------------------------------------------------APFIGKVISNEPLVKEGGIGIVQHIKFDLTG-GNLKYIEGQSIGIIPPGVDKNGKPEKLRLYSIASTRHGDDVDDKTISLCVRQLEYKHPESGETVYGVCSTYLT-HIEPGSEVKITGPVGKEMLLPDDPEANVIMLAGGTGITPMRTYLWRMFKDAERAANPEYQFKGFSWLVFGVPTTPNILYKEELEEIQQKYPDNFRLTYAISREQKNPQGGRMYIQDRVAEHADQLWQLIKNQKTHTYICGPPPMEEGIDAALSAAAAK-EGVTWSDY----- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2BMW.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -174315 for 1734 contacts (-100.5/contact) +
2D Compatibility (PS) -24617 + (NN) -8996 + (LL) 7084
1D Compatibility (HY) -16800 + (ID) 2650
Total energy: -220294.0 ( -127.04 by residue)
QMean score : 0.423
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