Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MLVEGSELQSGAQQPRTEAPQHGELQYLRQVEHIMRCGFKKEDRTGTGTLSVFGMQARYSLRDEFPLLTTKRVFWKGVLEELLWFIKGSTNAKELSSKGVRIWDANGSR--DFLDSLGFSARQEGDLGPVYGFQWRHFGADYK-------------------DMDSDYSG--------QGVDQLQKVIDTIKTNPDDRRIIMCAWNPKDLPLMALPPCHALCQF--YVVNGELSCQLYQRSGDMGLGVPFNIASYALLTYMIAHITGLQPGDFVHTLGDAHIYLNHIEPLKIQLQREPRPFPKLRILRKVETIDDF--------KV---EDFQIEGYNPHPTIKMEMAV |
| 3V8H Chain:A ((5-318)) | -----------------------MKQYLDLVRTILDTGTWQSN--GIRTIGIPGAMLRFDLQQGFPAVTTKKLAFKSAIGELVGFLRATRSAAEFRALGCKVWDANANENAQWLA--NPYRRGADDLGDVYGVQWRRWPG-YKVLDAHADAQIADATSRGFRIVARFEEGGADKVLLHKAIDQLRDCLDTIVRDPSSRRILFHGWNPAVLDEIALPACHLLYQFLPNVERREISLCLYIRSNDVGLGTPFNLAEGAALLTLVGRLTGYSPRWFTYFIGDAHIYENQLDMLKQQLEREPFESPRLELAERVPDYAKTGKYEPQWLERVEPSDFTLVGYRHH--------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3V8H.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -147492 for 2054 contacts (-71.8/contact) +
2D Compatibility (PS) -28543 + (NN) -9628 + (LL) 2436
1D Compatibility (HY) -20000 + (ID) 5300
Total energy: -208527.0 ( -101.52 by residue)
QMean score : 0.540
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