Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MAASSLEQKLSRLEAKLKQENREARRRIDLNLDISPQRPRPTLQLPLANDGGSRSPSSESSPQHPTPPARPRHMLGLPSTLFTPRSMESIEIDQKLQEIMKQTGYLTIGGQRYQAEINDLENLGEMGSGTCGQVWKMRFRKTGHVIAVKQMRRSGNKEENKRILMDLDVVLKSHDCPYIVQCFGTFITN--TDVFIAMELMGT-CAEKLKKRMQ-GPIPERILGKMTVAIVKALYYLKEKHGVIHRDVKPSNILLDERGQIKLCDFGISGRLVDSKAKTRSAGCAAYMAPERIDPPDPTKPDYDIRADVWSLGISLVELATGQFPYKNCKTDFEVLTKVLQEEPPLLPGHMGFSGDFQSFVKDCLTKDHRKRPKYNKLLEHSFIKRYETLEVDVASWFKDVMAKTESPRTSGVLSQPHLPFFR |
| 4OBO Chain:A ((26-311)) | -----------------------------------------------------------------------------------------------------------------------FELVEVVGNGTYGQVYKGRHVKTGQLAAIKVMDVT-------EIKLEINMLKKYSHHRNIATYYGAFIKKSDDQLWLVMEFCGAGSITDLVKNTKGNTLKEDWIAYISREILRGLAHLHI-HHVIHRDIKGQNVLLTENAEVKLVDFG----------RNTFIGTPYWMAPEVIACDENPDATYDYRSDLWSCGITAIEMAEGAPPLCDM-HPMRALFLIPRNPPPRLK-SKKWSKKFFSFIEGCLVKNYMQRPSTEQLLKHPFIRDQPN-ERQVRIQLKDHIDRTR----------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4OBO.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -165499 for 2069 contacts (-80.0/contact) +
2D Compatibility (PS) -28090 + (NN) -21561 + (LL) 7588
1D Compatibility (HY) -19600 + (ID) 4350
Total energy: -231512.0 ( -111.90 by residue)
QMean score : 0.524
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