Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MKIRVGINGLGRIGRSVLRAIHEVGKYNEQIEVVAVNGSLSTEQHAHLIRYDSVHGKFNGDIGFNESENWISTNGKKFSLYRERNPENIPW---DVDVVLECTGAFNKRAEAAKH---NTGKVIVSAPVSDADI-TIVYGVNNDMLKKE-HKVISAGSCTTNCLAPVVKVLHFNLDMKSGFMTTVHAYTNDQNVLDGNHRDLRRARACGLSIVPTTTGAAKTIGSVIPELKGKLDGTAIRVPVANVSMVDLKFTTDKKVTAKEINEIF----KNSVNDVLSICKEPLVSIDFVHNPYSAIVDLAGTYVT-GDICRVAAWYDNEWAFSLRMLDIALLCYNRI |
| 2D2I Chain:P ((1-336)) | MTIRVAINGFGRIGRNFLRCWF--GRQNTDLEVVAINNTSDARTAAHLLEYDSVLGRFNADISYDE--NSITVNGKTMKIVCDRNPLNLPWKEWDIDLVIESTGVFVTAEGASKHIQAGAKKVLITAPGKAEGVGTYVIGVNDSEYRHEDFAVISNASCTTNCLAPVAKVLHDNFGIIKGTMTTTHSYTLDQRILDASHRDLRRARAAAVNIVPTTTGAAKAVALVIPELKGKLNGIALRVPTPNVSVVDLVVQVEKPTITEQVNEVLQKASQTTMKGIIKYSDLPLVSSDFRGTDESSIVDSSLTLVMDGDLVKVIAWYDNEWGYSQRVVDLAELAARKS |
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General information:
TITO was launched using:
| RESULT:
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Template: 2D2I.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -243070 for 2805 contacts (-86.7/contact) +
2D Compatibility (PS) -35042 + (NN) -13159 + (LL) 372
1D Compatibility (HY) -29200 + (ID) 8150
Total energy: -328249.0 ( -117.02 by residue)
QMean score : 0.489
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