Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MLDKTTKNLLITEINKILPED-SQNRLISAVRYVLLAPAKHIRPFLVVASSQVFNVE--IERVISIAMAVECIHTYSLIHDDLPCMDNSDTRRGQLSCHKRFDKATAVLAGDALLTLAFEILSSLNEGSNKRCEIIKALSQAIGAKGMVGGQILDIKTALHVIQHHDYLDPESSVINEHTRQLCNKNRTLGSCAKITPDSKIKEIHLMKTAKLFAASCEIGAIIGSATDKQRRALYNYGVNLGLIFQAKDDIRDYKQDEV-----NNLMSMLSKSEIENYIDNLFKQALDNLGELS--GDTNYLYNLLNQVKRDD |
| 3PDE Chain:A ((17-297)) | -------PALNAPLKQAILADSQDAQLAAAMTYSVLAGGKRLRPLLTVATMQSLGVTFVPERHWRPVMALELLHTYSLIHDDLPAMDNDALRRGEPTNHVKFGAGMATLAGDGLLTLAFQWLTATDLPATMQAALVQALATAAGPSGMVAGQAKDIQSEHV----------------------------------NLPLSQLRVLHKEKTGALLHYAVQAGLILGQAPEAQWPAYLQFADAFGLAFQIYDDILDVVSS--ADEAKNTYPGKLGLIGANQALIDTIHSGQAALQGLPTSTQRDDLAAFFSYFDTER |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 3PDE.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -173909 for 2136 contacts (-81.4/contact) +
2D Compatibility (PS) -27156 + (NN) -5070 + (LL) 2728
1D Compatibility (HY) -11600 + (ID) 4350
Total energy: -219357.0 ( -102.70 by residue)
QMean score : 0.553
|
|
|