Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MSQAVKVERRETLKQKPNTSQLGFGKYFTDYMLSYDYDADKGWHDLKIVPYGPIEISPAAQGVHYGQSVFEGLKAYKRDGEVALFRPEENFKRLNNSLARLEMPQV-DEAELLEGLKQLVDIERDWIPEGEGQSLYIRPFVFATEGALGVGASH--QYKLLIILSPSGAYYG-GETLKPTKIYVEDEYVRAVRG-GVGFAKVAGNYAASLLAQTNANKLGYDQVLWLDGVEQKYIEEVGSMNIFFVENGKVITPELNGSILPGITRKSIIELAKNLGYEVEERRVSIDELFESYDKGELTEVFGSGTAAVISPVGTLRYEDREIVINNNETGEITQKLYDVYTGIQNGTLEDKNGWRVVVPKY |
| 1IYE Chain:A ((5-308)) | -------------------------------------KADYIWFNGEMVRWEDAKVHVMSHALHYGTSVFEGIRCYDSHKGPVVFRHREHMQRLHDSAKIYRFPVSQSIDELMEACRDVIRKNN-------LTSAYIRPLIFVGDVGMGVNPPAGYSTDVIIAAFPWGAYLGAEALEQGIDAMVSS-WNRAAPNTIPTAAKAGGNYLSSLLVGSEARRHGYQEGIALDVN--GYISEGAGENLFEVKDGVLFTPPFTSSALPGITRDAIIKLAKELGIEVREQVLSRESLYL------ADEVFMSGTAAEITPVRSVDGI----QVGEGRCGPVTKRIQQAFFGLFTGETEDKWGWLDQVN-- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1IYE.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -134178 for 2518 contacts (-53.3/contact) +
2D Compatibility (PS) -32234 + (NN) -9626 + (LL) 3464
1D Compatibility (HY) -15600 + (ID) 5100
Total energy: -193274.0 ( -76.76 by residue)
QMean score : 0.499
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