Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MTTVYYDQDVKTDALQG-KKIAVVGYGSQGHAHAQNLKDN------GYDVVIGIRPGR-SFDKAKEDGFDV-----FPVAEAVKQADVIMVLLPDEIQGDVYKNEIEPNLEKHNALAFAHGFNIHFGV---IQPPADVDVFLVAPKGPGHLVRRTFVEG-----SAVPSLFGIQQDASGQARNIALSYAKGIGATRAGVIETTFKEETETDLFGEQAVLCGGVSKLIQSGFETLVEAGYQPELAYFEVLHEMKLIV-DLMYEGGMENVRYSISNTAEFGDYVSGPRVITPDVK-------ENMKAVLTDIQNGNFSNRFIEDNK-----NGFKEFYKLREEQHGHQIEKVGRELREMMPFIKSKSIEK |
| 3FR7 Chain:A ((47-386)) | ----------LPEAFKGIKQIGVIGWGSQGPAQAQNLRDSLAEAKSDIVVKIGLRKGSKSFDEARAAGFTEESGTLGDIWETVSGSDLVLLLISDAAQADNYEK-IFSHMKPNSILGLSHGFLLGHLQSAGLDFPKNISVIAVCPKGMGPSVRRLYVQGKEINGAGINSSFAVHQDVDGRATDVALGWSVALGSP--FTFATTLEQEYKSDIFGERGILLGAVHGIVEALFRRYTEQGMDEEMAYKNTVEGITGIISKTISKKGMLEVYNSLTEEG--------KKEFNKAYSASFYPCMDILYECYEDVASGSEIRSVVLAGRRFYEKEGLPAFP--MGNIDQTRMWKVGEKVRSTRPENDL----- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3FR7.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -114982 for 2298 contacts (-50.0/contact) +
2D Compatibility (PS) -32666 + (NN) -3720 + (LL) 1916
1D Compatibility (HY) -21200 + (ID) 4550
Total energy: -175202.0 ( -76.24 by residue)
QMean score : 0.423
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