Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MQHHKVAIIGAGAAGIGMAITLKDFGI-TDVIILEKGTVGHSFKHWPKSTRTITPSFTSNGFGMPDMNAISMDTSPAFTFNEEHISGETYAEYLQVVANHYELNIFENTVVTNISADDAYYTIATTTETYHADYIFVATGDYNF-PKKP--F-KYGIHYSEIEDFDN-----FNKGQYVVIGGNESGFDAAYQLAKNGSDIALYTSTTGLNDPDADPSVRLSPYTRQRLGNVIKQGARIEMNVHYTVKDIDFNNGQYHISFDSGQSVHTPHEPILATGFDATKNPIVQQL-FVTTNQDIKLTTHDESTRYPNIFMIGATVENDNAKLCYIYKFRARFAVLAHLLTQREGLPAKQEVIENYQKNQMYLDDYSCCEVSCTC |
| 2V3A Chain:A ((4-306)) | --RAPLVIIGTGLAGYNLAREWRKLDGETPLLMITADD-G--RSYS--KPML-STGFS----KNKD---------------ADG----LAMAEPGAMAEQLNARILTHTRVTGIDPGH--QRIWIGEEEVRYRDLVLAWGAEPIRVPVEGDAQDALYPINDLEDYARFRQAAAGKRRVLLLGAGLIGCEFANDLSSGGYQLDVVAPCEQVMPGLLH------PAAAKAVQAGLEGL-GVRFHLGPVLASLKKAGEGLEAHLSDGEVIPC-DLVVSAVGLRPRTEL-AFAAGLAVN-RGIVVDRSLR-TSHANIYALGDCAEVDGLNLLYVMPLMACARALAQTLAGN-------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2V3A.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -163865 for 2431 contacts (-67.4/contact) +
2D Compatibility (PS) -30935 + (NN) -5595 + (LL) 4144
1D Compatibility (HY) -12400 + (ID) 2300
Total energy: -210951.0 ( -86.78 by residue)
QMean score : 0.399
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