Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MRALETIATLREYRK---SLKESVGFVPTMGALHRGHQSLIERSLKENSHTIVSVFVNPTQFGANEDFSAYPRPLEKDLALCEKSGVNAVFAPKIGEMYPYEAKQRLKLYAPAFLSHSLEGAVRKGHFDGVVQVVLRLFHLTNPTRAYFGKKDAQQLLIIQHLVQDLLLDIEIAPCEIVRDSDNLALSSRNVCLNATERKQALAIPKALEKIQQAIDRGEKAC--------EKLKKLGLEILKNLEVDYLECCNHKLEPLKTIEPANTLVLVAARVGKTRLLDNLWV |
3MXT Chain:A ((4-281)) | MQVITSVKEAKQIVKDWKSHQLSIGYVPTMGFLHDGHLSLVKHAKT-QDKVIVSIFVNPMQFGPNEDFSSYPRDLERDIKMCQDNGVDMVFIPDATQMYLKNF---STYVDMNTITDKLCGAKRPGHFRGVCTVLTKFFNILNPDIVYMGQKDAQQCVVVRHMVDDLNFDLKIQICPIIREEDGLAKSSRNVYLSKEERKASLAISQSIFLAEKLVREGEKNTSKIIQAMKDILEK-----EKLIKIDYIELVDFNTMENIENITDNVLGAVAAFVGKTRLIDNFLV |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 3MXT.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -122334 for 2181 contacts (-56.1/contact) +
2D Compatibility (PS) -28601 + (NN) -10436 + (LL) 876
1D Compatibility (HY) -23600 + (ID) 5600
Total energy: -189695.0 ( -86.98 by residue)
QMean score : 0.340
|
|
|