Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MVVLGSTGSIGKNALKIAKK-FGVKIEALSCGKNIALINEQIKVFKPKKVAILDPNDLNNLEPLGAEVFVGLDGIDAMIEECVSNLVINAIVGVAGLKASFKSLQRNKKLALANKESLVSAGHLLDI------SQITPVDSEHFGLWALLQNKTLKPKSLIISASGGAFRDTPLDLIAIQNAQNALKHPNWSMGDKITIDSASMVNKLFEILETYWLFGASL-KIDALIERSSIVHALVEFEDNSVIAHLASADMQLPISYAINPKLASLSASIKPLDLYALSAIKFEPISVERYTLWRYKDLLLENPK-LGVVLNASNEVAMKKFLNQEIAFGGFIQIISQALELYAKKSFK-LSSLDEVLALDKEVRERFGSVARV |
| 3A06 Chain:A ((6-369)) | LVILGATGSIGTQTLDVLKKVKGIRLIGISFHSNLELAFKIVKEFNVKNVAITGDVEFEDS---SINVWKGSHSIEEMLEALKPDITMVAVSGFSGLRAVLASLEHSKRVCLANKESLVCGGFLVKKKLKEKGTELIPVDSEHSAIFQVMEP---EVEKVVLTASGGALRDWKISKIDRARPEDVLKHPVWNMGARITVDSATMVNKAFEVLEAMELFELPFEKIEVKIHREGLVHGAVVLPDGNVKMVVSPPDMRIPISYALFYPRRVAL---EP-FFLRTISLSFEDPDPEKYPAFFLLKEIKD-SYALRTAFNAADEVAVEAFLKGRIRFGGIHRVIEKTLEEFQG--YPQPRTLDDVERIHFEAIKKAERVTEW |
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General information:
TITO was launched using:
| RESULT:
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Template: 3A06.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -201127 for 3068 contacts (-65.6/contact) +
2D Compatibility (PS) -36879 + (NN) -2758 + (LL) 884
1D Compatibility (HY) -26800 + (ID) 6050
Total energy: -272730.0 ( -88.90 by residue)
QMean score : 0.418
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