Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MFKIGNVEIKNQVVVAP-MAGISNSAFRLTVKEFGAGLVCCE-MISDKGI-AYRNAKTLDMLYIDEKEKPLSLQIFGGEKETLVEAAKFVAENTTADIIDINMGCPVNKIIKCEAGAKWLLDPNKVYDMVAAVVDAVDKPVTVKMRIGWDEEHVFAIENALAAERAGAAAVAMHGRTRVQMYEGSANWDVLRDVKRELKIPFMANGDVRTPEDAKRILEHTGADGVMIGRAALGNPWMIYRTVKFLETGELLLEPEPREKMQTAMLHLNRLVELKGENIAVREF-RQHAAYYLKGARGSTRAKVAA-NQATKQSEME-AILNEFVLQYEEKALAKQD |
| 1VHN Chain:A ((5-309)) | ----------VKVGLAPMA-GYTDSAFRTLAFEWGADFAFSEMVSAKGFLMNSQKTEELLP---QPHERNVAVQIFGSEPNELSEAARILSEK--YKWIDLNAGCPVRKVVKEGAGGALLKDLRHFRYIVRELRKSVSGKFSVKTRLGWEKNEVEEIYRILVE--EGVDEVFIHTRTVVQSFTGRAEWKALSVLEKR--IPTFVSGDIFTPEDAKRALEESGCDGLLVARGAIGRPWIFKQIKDFLRSGKYS-EPSREEILRTFERHLELLIKTKGERKAVVE-MRKFLAGYTKDLKGARRFREKVMKIEEVQILKEMF----------YNFIKEVE |
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General information:
TITO was launched using:
| RESULT:
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Template: 1VHN.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -144270 for 2546 contacts (-56.7/contact) +
2D Compatibility (PS) -32493 + (NN) -11242 + (LL) 3612
1D Compatibility (HY) -13600 + (ID) 5150
Total energy: -203143.0 ( -79.79 by residue)
QMean score : 0.499
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