Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MSITNLLNIKYPIIQGAMAQIAKAPLVAAVSNAGGLGIIASGG-MTADMLREEIQKTKALTDKAFGVNLMLMMT----NIAELTEVIIEEKVGIVTTGAGTPKTFMPIWKEAGIIVIPVVPSVMIAKRMEKMGADAVIAEGTEAGGHVGE--TTTMALLPQIVDAVTIPVIGAGGIADGRGIVAALALGAKGVQIGTRFLATDECPVHPDFKAAVIKASDRDTMVTGRKAGAPVRSIKNKMIKEYIRLEEENA-DRDTLEELTL-GSLRKAVQEGDTDNGSVMAGQIAGLITEIKPCKDVIEEMMTDAKKVIAGLELK |
| 2GJL Chain:A ((6-320)) | TRFTETFGVEHPIMQGGMQWVGRAEMAAAVANAGGLATLSALTQPSPEALAAEIARCRELTDRPFGVNLTLLPTQKPVPYAEYRAAIIEAGIRVVETAGNDPGEHIAEFRRHGVKVIHKCTAVRHALKAERLGVDAVSIDGFECAGHPGEDDIPGLVLLPAAANRLRVPIIASGGFADGRGLVAALALGADAINMGTRFLATRECPIHPAVKAAIRAADERSTDLIMRSLRNTARVARNAISQEVLAIEARGGAGYADIAALVSGQRGRQVYQQGDTDLGIWSAGMVQGLIDDEPACAELLRDIVEQARQLVRQR--- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2GJL.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -214827 for 2753 contacts (-78.0/contact) +
2D Compatibility (PS) -33313 + (NN) -11819 + (LL) 344
1D Compatibility (HY) -17200 + (ID) 5500
Total energy: -282315.0 ( -102.55 by residue)
QMean score : 0.546
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