Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MEQMDAHQIISFIQNSKKATPVKVYLKGDLEKIDFPSDVKTFITGNAGTVFGEWAVVEPLLEANKANIEDYVIENDRRNSAIPLLDMKNINARIEPGAVIRDQVTIGDNAVIMMGASINIG---SVIGDGTMIDMNVVLG-GRATVGKNCHIGAGSVLAGVVEPPSAQPVIVEDNVVVGANVVVLEGVRIGEGAVVAAGAIVTKD--VAPGTVVAGIPARELKKLDAKTASKTEIMQELRQL
3IXC Chain:A ((38-171))
-----------------------------------------------------------------------------------------STAFIAGNARIIGDVCIGKNASIWYGTVLRGDVDKIEVGEGTNIQDNTVVHTGDTVIGKFVTIGHSCILHA---------CTLGNNAFVGMGSIVMDRAVMEEGSMLAAGSLLTRGKIVKSGELWAGRPAKFLRMMTEE--------------
General information:
TITO was launched using:
RESULT:
Template:
3IXC.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -152948 for 994 contacts (-153.9/contact) +
2D Compatibility (PS) -14725 + (NN) -8705 + (LL) 8032
1D Compatibility (HY) -8400 + (ID) 2000
Total energy: -178746.0 ( -179.82 by residue)
QMean score : 0.577
(partial model without unconserved sides chains):
PDB file :
Tito_3IXC.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3IXC-query.scw
PDB file :
Tito_Scwrl_3IXC.pdb
: