Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MLTMDDIVREGHPALREVATEVTFPLSDEEKKLGRDMLEFLINSQDEDLAEKYGLRGGVGIAAPQLAVTKRFLAIHVHDEKDRLYSYVLYNPKIRSHSVQQACLSGGEGCLSVDREVPGYVVRSERVTIDAFDENGTPLKLRFKGYPAIVIQHEIDHLNGIMFYDHINKENPSYLPPDVDVFG
2OKL Chain:A ((2-183))
MLTMKDVIREGDPILRNVAEEVSLPASEEDTTTLKEMIEFVINSQDPEMAEKYSLRPGIGLAAPQIGVSKKMIAVHVTDADGTLYSHALFNPKIISHSVERTYLQGGEGCLSVDREVPGYVPRYTRITVKATSINGEEVKLRLKGLPAIVFQHEIDHLNGVMFYDHINKENPFAAPDDSKPL-
General information:
TITO was launched using:
RESULT:
Template:
2OKL.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -94736 for 1435 contacts (-66.0/contact) +
2D Compatibility (PS) -19124 + (NN) -6684 + (LL) -172
1D Compatibility (HY) -18400 + (ID) 5500
Total energy: -144616.0 ( -100.78 by residue)
QMean score : 0.619
(partial model without unconserved sides chains):
PDB file :
Tito_2OKL.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2OKL-query.scw
PDB file :
Tito_Scwrl_2OKL.pdb
: