Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MNKEEMNARQKKIRNFSIIAHIDHGKSTLADRILEQTGALTHREMKNQLLDSMDLERERGITIKLNAVQLKYKAKDGETYIFHLIDTPGHVDFTYEVSRSLAACEGAILVVDAAQGIEAQT---------------------------LANVYLALDNDLEILPV---------------------------------INKIDLPAADPERVREEIEDVIGLDA-----------------SDAVLASAKSGI-----------------GIEDILEQIVE------------------KVPEPSGDVNKPLKALIFDSVFDAYRGVIANIRIMDGVVKAGDRIKMMSNGKEFEVTEVGVFSPKATPR-DELLVGDVGYLTAAIKNVGDTRVGDTITLANNPAEEALDGYRKLNPMVYCGLYPIDSSKYNDLRDALEKLELNDSALQFEAETSQALGFGFRCGFLGLLHMEIIQERIEREFNIDLITTAPSVIYHVNLTDGSNIVVDNPAEMPEPGVIESVEEPYVKATVMVPNDYVGAVMELAQNKRGNFITMEYLDDIRVSIVYEIPLSEIVYDFFDQLKSSTKGYASFDYELIGYKASKLVKMDILLNAEKVDALSFIVHRDFAYERGKIIVEKLKELIPRQ--QFEVPIQAAIATKIVSRSTIKALRKNVLAKCYGGDVSRKRKLLEKQKEGKKRMKQIGSVEVPQEAFMAILKMDESK-- |
| 4M1K Chain:A ((6-688)) | ------EYDLKRLRNIGIAAHIDAGKTTTTERILYYTG-------------------------RIAAVTTCFW----KDHRINIIDTPGHVDFTIEVERSMRVLDGAIVVFDSSQGVEPQSETVWRQAEKYKVPRIAFANKMDKTGADLWLVIRTMQERLGARPVVMQLPIGREDTFSGIIDVLRMKAYTYGNDLGTDIREIPIPEEYLDQAREYHEKLVEVAADFDENIMLKYLEGEEPTEEELVAAIRKGTIDLKITPVFLGSALKNKGVQLLLDAVVDYLPSPLDIPPIKGTTPEGEVVEIHPDPNGPLAALAFKIMADPYVGRLTFIRVYSGTLTSGSYVYNTTKGRKERVARLLRMHANHREEVEELKAGDLG----AVVGLKETITGDTLVGEDAPRVI-LESIEVPEPVIDVAIEPKTKADQEKLSQALARLAEEDP--TFRVSTHPETGQTIISG-MGELHLEIIVDRLKREFKVDANVGKPQVAYRETITKPVDVEGKFIRLTGGRG-------QYGHVKIKVEPLPRGSGFEFVNAIVGGVIPKEYIPAVQKGIEEAMQ------------SGPLIGFPVVDIKVTLYDGSY---HEVDSSEMAFKIAGSMAIKEAVQKGDPVILEPIMRVEVTTPEEYMGDVIGDLNAR---RGQILGMEPRGNAQVIRAFVPLAE-MFGYATDLRSKTQGRGSFVMFFDHYQEVPKQVQEKLI |
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General information:
TITO was launched using:
| RESULT:
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Template: 4M1K.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -126610 for 4112 contacts (-30.8/contact) +
2D Compatibility (PS) -57086 + (NN) -6648 + (LL) 6696
1D Compatibility (HY) -22400 + (ID) 6900
Total energy: -212948.0 ( -51.79 by residue)
QMean score : 0.300
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