Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | LKIYKALGWFFKENWKSYAFGVTILFTIALLQLVPPQIIGYTVDAVTNDSLT-KDKLIKWMIILVVAAILAYGGRYVWRMLIFGSDNKLQRTLRLRLFEHFTKMSPFFFQRYRTGDLMAHATNDITAIQQVAGIGVLTLSDSVL-TGGTVIATMAITIDWRLTLIALLPMPFMVLGSSILGKKLHDRFHGAQAAFSMLNDKTQESISGIKVTRTFGQEKEDIQDFAKQTKEVVQKNISVAKVDAMFDPMISIIVGVSFVLSLGFGAKFVVDGELTIGQVIAFSNYLFLLIWPMLAFGFLYNIIQRGNASYDRVQHLLAEKEDVLDQEGA----LDTVP-VGDLQVTMDKFTYPDES-EPVLADIHFNLKAGETLGIVGRTGSGKTSLLKLLMREYDTY---EGKIAFANVKIQDYTVRALREAIGYVPQDQFLFSTTVRDNIRFGKPDAPQEEVTKIAKLVSVDEDILGFENGYDTIVGERGVSLSGGQKQRLAIARALIMNPELLILDDALSAVDAKTEEQILANLKENR--SDKTTIISAHRLSSVEHANLIIVIDKGRIVERGTHMELMAL--DGWYAEMFREQQLEEALEEGGVADGSDE |
| 3WMG Chain:A ((29-598)) | -----------------IVIGFIASILEGATLPAFAIVFGRMFQVFTKSKSQIEGETWKYSVGFVGIGVFEFIVAGSRTALFGIASERLARDLRVAAFSNLVEQDVTYFDRRKAGELGGKLNNDVQVIQYSFSKLG-AVLFNLAQCVVGII-VA-FIFAPALTGVLIALSPLVVLAVVVQMIEMSGNTKRSSEAYASAGSVAAEVFSNIRTTKAFEAERYETQRYGSKLDPLYRLGRRRYISDGLFFGLSMLVIFCVYALALWWGGQLIARGSLNLGNLLTAFFSAILGFMGVGQAAQVWPDVTRGLGAGGELFAMIDRVPQYRRPDPGAEVVTQPLVLKQGIVFENVHFRYPTRMNVEVLRGISLTIPNGKTVAIVGGSGAGKSTIIQLLMRFYDIEPQGGGLLLFDGTPAWNYDFHALRSQIGLVSQEPVLFSGTIRDNILYGKRDATDEEVIQALREANAYSFVMALPDGLDTEVGERGLALSGGQKQRIAIARAILKHPTLLCLDESTSALDAESEALVQEALDRMMASDGVTSVVIAHRLSTVARADLILVMQDGVVVEQGNHSELMALGPSGFYYQLVEKQLAS-------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3WMG.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -257457 for 4117 contacts (-62.5/contact) +
2D Compatibility (PS) -58888 + (NN) -20051 + (LL) 2288
1D Compatibility (HY) -31600 + (ID) 7250
Total energy: -372958.0 ( -90.59 by residue)
QMean score : 0.309
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