Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MKILLIGASGTLGSAVKDRLEK-KAEVITAGRHSG-------------DVTVDITSIDSIKKMYEQVGKVDAIVSATGSATFSPLTELTPEKNAVTISSKLGGQINLVLLGIDSLND---KGSFTLTTGIMMEDPIVQGASAAMANGAVTAFAKSAAIEM-PRGIRINTVSPNVLEESWDKL-----------ESFFQGFVPVPAAKVARAFEKSVFGA---QTGESYKVY |
| 1CYD Chain:A ((8-238)) | LRALVTGAGKGIGRDTVKALHASGAKVVAVTRTNSDLVSLAKECPGIEPVCVDLGDWDATEKALGGIGPVDLLVNNAALVIMQPFLEVTKEAFDRSFSVNLRSVFQVSQMVARDMINRGVPGSIVNVSSMVAHVTFPNLITYSSTKGAMTMLTKAMAMELGPHKIRVNSVNPTVVLTDMGKKVSADPEFARKLKERHPLRKFAEVEDVVNSILFLLSDRSASTSGGGILVD |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 1CYD.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -84543 for 1635 contacts (-51.7/contact) +
2D Compatibility (PS) -20929 + (NN) -3064 + (LL) 0
1D Compatibility (HY) -9200 + (ID) 2100
Total energy: -119836.0 ( -73.29 by residue)
QMean score : 0.415
|
|
|