Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MEHNKLKPFPKDFLWGSASAAYQVEGAWDEDGKGPSVWDEFVRIPGTT--FKETNGDVAVDNYHRYKEDVALMAEQGLKAYRFSVAWSRVIPHGN--GEVNEAGLKFYDNLIDELLSYGIEPVVTLYHWDIPQGLQDEYGGWESRKVVEDFTNYAALLFERFNGRVKYWVTLNEQNVFISHGYKLAYHPPGVSDD------------KRMFAANHNANLANASAIAKFRELG--TSGKIGPSFAYGPSYSIDAN-PANVLASENSEEFNAHFWMDVYTWGEYPTATWNWLEEHGLAPEILPGDTELLKKGKPDFMGVNYYRSMTHAFNGKDGVGSGKMNTTGEKGT-SEETGVPGLY--------KNTNNPYLEKTNWDWDIDPTGLRIGLRRITNRYK-LPIMITENGLGEYDSLTEDHKIHDEYRIEYIRAHALAIQEAI-TDGVEMLGYCTWSFTDLLSWLNGYQKRYGFVYVDRDENDEKELKRYKKDSFYWYKKTIEANGANLVEEQGK |
| 1E4M Chain:M ((20-500)) | ---LNSSSFSSDFIFGVASSAYQIEGTI---GRGLNIWDGFTHRYPNKSGPDHGNGDTTCDSFSYWQKDIDVLDELNATGYRFSIAWSRIIPRGKRSRGVNEKGIDYYHGLISGLIKKGITPFVTLFHWDLPQTLQDEYEGFLDPQIIDDFKDYADLCFEEFGDSVKYWLTINQLYSVPTRGYGSALDAPGRCSPTVDPSCYAGNSSTEPYIVAHHQLLAHAKVVDLYRKNYTHQGGKIGPTMITRWFLPYNDTDRHSIAATERMKEFFLGWFMGPLTNGTYPQIMIDTVG--ERLPSFSPEESNLV-KGSYDFLGLNYYFTQYAQPSPNPVN-------STNHTAMMD-AGAKLTYINASGHYIGPLFEKDKADSTDNIYYYPKGIYSVMDYFKNKYYNPLIYVTENGISTPGDENRNQSMLDYTRIDYLCSHLCFLNKVIKEKDVNVKGYLAWALGDNYEFNKGFTVRFGLSYIDWNNV----TDRDLKKSGQWYQSFIS------------ |
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General information:
TITO was launched using:
| RESULT:
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Template: 1E4M.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -130384 for 4058 contacts (-32.1/contact) +
2D Compatibility (PS) -47787 + (NN) -18406 + (LL) 1236
1D Compatibility (HY) -29600 + (ID) 7000
Total energy: -231941.0 ( -57.16 by residue)
QMean score : 0.419
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