Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMNFSLEGRNIVVMGVANKRSIAWGIARSLHEAGARLIFTYAGERLEKSVHELAGTLDRNDS-----------IILPCDVTNDAEIETCFASIKEQVG----VIH--GIAHCIAFANKEELVGEYLNTNRDGFLLAHNISSYSLTAVVKAARPMMTE---GGSIVTLTYLGGELVMPNY--NVMGVAKASLDASVKYLAADLGK-ENIRVNSISAGPIRTLSAKGISDFNSILKDIEERAPLRRTTTPEEVGDTAAFLFS-DMSRGITGENLHVDSGFHITAR---
1DFI Chain:A ((1-257))-G-FLSGKRILVTGVASKLSIAYGIAQAMHREGAELAFTYQNDKLKGRVEEFAAQLG----SDIVLQCDVAE---------DASIDTMFAELGKVWPKFDGFVHSIGFAPGDQLD-GDYVNAVT----REGFKIAHDISSYSFVAMAKACRSM---LNPGSALLTLSYLGAER-AIPNYN-VMGLAKASLEANVRYMAN-AMGPEGVRVNAISAGPIRTL------MLAHCEA-VTPI--RRTV-TIEDVGNSAAFLCSD-LSAGISGEVVHVDGGFSIAA-MNE


General information:
TITO was launched using:
RESULT:

Template: 1DFI.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 1056 -137245 -129.97 -623.84
target 2D structure prediction score : 0.60
Monomeric hydrophicity matching model chain A : 0.77

3D Compatibility (PKB) : -129.97
2D Compatibility (Sec. Struct. Predict.) : 0.60
1D Compatibility (Hydrophobicity) : 0.77
QMean score : 0.481

(partial model without unconserved sides chains):
PDB file : Tito_1DFI.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-1DFI-query.scw
PDB file : Tito_Scwrl_1DFI.pdb: