Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MPGVQDRVIVVTGAGGGLGREYALTLAGEGASVVVNDLGGARDGTGAGSAMADEVVAEIRDKGGRAVANYDSVATEDGAANIIKTALDEFGAVHGVVSNAGILRDGTFHKMSFENWDAVLKVHLYGGYHVLRAAWPHFREQSYGRVVVATSTSGLFGNFGQTNYGAAKLGLVGLINTLALEGAKYNIHANALAP-IAATRMTQDILPPEVLEKLT----------PEFVAPVVAYLCTEECADNASVYVVGGGKVQRVALFGNDGANFDKPPSVQDVAARWAEITDLSGAKIAGFKL |
4N5M Chain:B ((28-252)) | ------RIAYVTGGMGGIGTAICQRLAKDGFRVVA--------GCGPNSPRREKWLEQQKALGFDFIASEGNVADWDSTKTAFDKVKSEVGEVDVLINNAGITRDVVFRKMTRADWDAVIDTNLTSLFNVTKQVIDGMADRGWGRIVNISSVNGQKGQFGQTNYSTAKAGLHGFTMALAQEVATKGVTVNTVSPGYIATDMVKAI-RQDVLDKIVATIPVKRLGLPEEIASICAWLSSEE--------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4N5M.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -130691 for 1775 contacts (-73.6/contact) +
2D Compatibility (PS) -22902 + (NN) -8880 + (LL) 3092
1D Compatibility (HY) -10400 + (ID) 3750
Total energy: -173531.0 ( -97.76 by residue)
QMean score : 0.461
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