Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMPGVQDRVIVVTGAGGGLGREYALTLAGEGASVVVNDLGGARDGTGAGSAMADEVVAEIRDKGGRAVANYDSVATEDGAANIIKTALDEFGAVHGVVSNAGILRDGTFHKMSFENWDAVLKVHLYGGYHVLRAAWPHFREQSYGRVVVATSTSGLFGNFGQTNYGAAKLGLVGLINTLALEGAKYNIHANALAP-IAATRMTQDILPPEVLEKLT----------PEFVAPVVAYLCTEECADNASVYVVGGGKVQRVALFGNDGANFDKPPSVQDVAARWAEITDLSGAKIAGFKL
4N5M Chain:B ((28-252))------RIAYVTGGMGGIGTAICQRLAKDGFRVVA--------GCGPNSPRREKWLEQQKALGFDFIASEGNVADWDSTKTAFDKVKSEVGEVDVLINNAGITRDVVFRKMTRADWDAVIDTNLTSLFNVTKQVIDGMADRGWGRIVNISSVNGQKGQFGQTNYSTAKAGLHGFTMALAQEVATKGVTVNTVSPGYIATDMVKAI-RQDVLDKIVATIPVKRLGLPEEIASICAWLSSEE---------------------------------------------------------


General information:
TITO was launched using:
RESULT:

Template: 4N5M.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -130691 for 1775 contacts (-73.6/contact) +
2D Compatibility (PS) -22902 + (NN) -8880 + (LL) 3092
1D Compatibility (HY) -10400 + (ID) 3750
Total energy: -173531.0 ( -97.76 by residue)
QMean score : 0.461

(partial model without unconserved sides chains):
PDB file : Tito_4N5M.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-4N5M-query.scw
PDB file : Tito_Scwrl_4N5M.pdb: