Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MTGFGLRLAEAKAR-RGPLCLGIDPHPELLRGWDLAT-----------------------------------------TADGLAAFCDICVRAFADF-AVVKPQVAFFESYGAAGFAVLERTIAELRAADVLVLADAKRGDIGATMSAYATAWVGDSPLAADAVTASPYLGFGSLRPLLEVA-AAHGRGVFVLAATSNPEGAAVQNAAA-DGRSVAQLVVDQVGAANEA-A-GPGPGSIGVVVGATAPQA---PDLSAFTGPVLVPGVGVQGGRPEALGGLGGA-ASSQLLPAVAREVLRAGPGVPELRAAGERMRDAVAYLAAV |
| 2FFC Chain:A ((20-346)) | --NLKIKLQKRRDEVNTCLCIGLDPDEADIKSFMQSEKQNGYQSVKKNLSNSGELFAPQMGGQMLLATPPKEAQEKDEFFYFFNHFCFYIINETKEYALAYKMNFAFYLPYGSLGVDVLKNVFDYLHHLNVPTILDIKMNDIGNTVKHYRKFIFDY--LRSDSCTANIYMGTQMLRDICLDEECKRYYSTFVLVKTTNADSHIFQNRLSLDGKEAYVVIAEEVQKMAKQLHLEENGEFVGFVVGANCYDEIKKIRELFPDCYILAPGVGAQKGDLRKMLCNGYSKNYEKVLINVGRAITKSGSPQQ----AAREYHQQIKE---- |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 2FFC.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -155261 for 2171 contacts (-71.5/contact) +
2D Compatibility (PS) -28171 + (NN) -6624 + (LL) 1272
1D Compatibility (HY) -16800 + (ID) 3050
Total energy: -208634.0 ( -96.10 by residue)
QMean score : 0.466
|
|
|