Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MNLGDLTNFVEKPLAAVSNIVNTPNSAGRYRPFYLRNLLDAVQGRNLNDA--VKGKVVLITGGSSGIGAAAAKKIAEAGGTVVLVARTLENLENVANDIRAIRGNGGTAHVYPCDLSDMD--AIAVMADQVLGDLGGVDILINNAGRSIRRSLELSYDR---IHDYQRTMQLNYLGAVQLILKFIPGMRE-RHFGHIVNVSSVGVQTRAPR--FGAYIASKAALDSLCDALQAETVH-DNVRFTTVHMALVRTPMISPTTIYDKFPTLTPDQAAGVITDAIVHRPRRASSPFGQFAAVADAVNPAVMDRVRNRA--FNMFGDSSAAKGSESQTDTSELDKRSETFVRATRGIHW |
| 1HDC Chain:A ((1-254)) | -------------------------------------------------NDLSG-KTVIITGGARGLGAEAARQAVAAGARVVLADV---LDEEGAATAREL-GDA--ARYQHLDVTI--EEDWQRVVAYAREEFGSVDGLVNNAGIST---G--MFLETESVERFRKVVEINLTGVFIGMKTVIPAMKDAG-GGSIVNISSAAGLM-GLALTS-SYGASKWGVRGLSKLAAV-ELGTDRIRVNSVHPGMTYTPMTAETGIR------------QGEGNYP-NTPM--GRVG-EPGEIAGAVVKLLSD-TSSYVTGAELAVDGGWTTGPTVKYV---MGQ-------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1HDC.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -173688 for 2069 contacts (-83.9/contact) +
2D Compatibility (PS) -26537 + (NN) -8753 + (LL) 5292
1D Compatibility (HY) -3600 + (ID) 3150
Total energy: -210436.0 ( -101.71 by residue)
QMean score : 0.510
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