Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MKAIFITGAGSGMGREGATLFHANGWRVGAIDRNEDGLAALRVQLGAERLWARAVDVTDKAALEGALADFCAGNVGGGLDMMWNNAGIGEGGWFEDVPYEAAVRVVDVNFKAVLTGAYAALPYLKKAPGSLMFSTSSSSGT-YGMPRIAVYSATKHAVKGLTEALSVEWQRHGVRVADVLPGLIDTAILTSTRQHSDEGPYTISAEQIRAAAPKKGMFRLMPSSSVAEAAWRAYQHPTRLHWYVPRSIRWIDRLKGVSPEFVRRHIAKSLATLEPKRK |
2AG5 Chain:A ((6-228)) | GKVIILTAAAQGIGQAAALAFAREGAKVIATDINESKLQELEK---YPGIQTRVLDVTKKKQIDQFANE------VERLDVLFNVAGFVHHGTVLDCEEKDWDFSMNLNVRSMYLMIKAFLPKMLAQKSGNIINMSSVASSVKGVVNRCVYSTTKAAVIGLTKSVAADFIQQGIRCNCVCPGTVDTPSLQERIQARGNP-----EEARNDFLKRQKTGRFATAEEIAMLCVYLASDE----------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2AG5.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -74639 for 1811 contacts (-41.2/contact) +
2D Compatibility (PS) -24099 + (NN) -10699 + (LL) 3896
1D Compatibility (HY) -8000 + (ID) 2850
Total energy: -116391.0 ( -64.27 by residue)
QMean score : 0.457
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