Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MTSGSLQFTVLRAVNPATDAQRESMLREPGFGKYHTDHMVSIDYAEGRGWHNARVIPYGPIELDPSAIVLHYAQEVFEGLKAYRWADGSIVSFRADANAARLRSSARRLAIPELPDAVFIESLRQLIAVDKAWVPGAGGEEALYLRPFIFATEPGLGVRPATQYRYLLIASPAGAYFKGGIAPVSVWVSTEYVRACPGGTGAAKFGGNYAASLLAQAEAAENGCDQVVWLDAVERRY--IEEMGGMNIFFVLGSGGSARLVTPELSGSLLPGITRDSLLQLAI-DAGFAVEERRIDIDEWQKKAAAGEITEVFACGTAAVITPVARVRHG-ASEFRIADGQPGEVTMALRDTLTGIQRGTFADTHGWMARLG |
3UZO Chain:A ((24-358)) | -----------------------IDWSTLGFSYIRTDLRYLAHWKD-GEWDAGTLTEDNQIHLAEGSTALHYGQQCFEGLKAYRCADGSINLFRPDQNAARMRMSCRRLLMPELSDEQFIDACLQVVRANEHFLPPYGTGGSLYLRPFVIGVGDNIGVRTAPEFIFSVFCVPVGPYFKGGLTPTNFITSD-YDRAAPHGTGAAKVGGNYAASLLPGYEAKKRDFADVIYLDPA--THTTIEEAGAANFFAITQDG--QKFVTPQS-PSILPSITKYSLLWLAEHRLGLEVEEGDIRIDELGKF------SEAGACGTAAVITPIGGIQHGDDFHVFYSESEPGPVTRRLYDELVGIQYGDKEAPEGWIVKV- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3UZO.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -205521 for 2815 contacts (-73.0/contact) +
2D Compatibility (PS) -36459 + (NN) -13556 + (LL) 1988
1D Compatibility (HY) -24000 + (ID) 7150
Total energy: -284698.0 ( -101.14 by residue)
QMean score : 0.422
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