Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MTSLDLTGRTAIITGASRGIGLAIAQQLAAAGAHVVLTARRQEAADEAAAQVG--DRALGVGAHAVDEDAARRCVDLTLERFGSVDILINNAGTNPAYGPLLEQDHARFAKIFDVNLWAPLMWTSLVVTAWMGEH-GGAVVNTASIGGMHQSPAMGMYNATKAALIHVTKQLALELSPR---IRVNAICPGVVRTRLAEALWKDHEDPLAAT-IALGRIGEPADIASAVAFLVSDAASWITGETMIIDGGLLLGNALGFRAAPSTEH
1ZK4 Chain:A ((4-248))
-----LDGKVAIITGGTLGIGLAIATKFVEEGAKVMITGRHSDVGEKAAKSVGTPDQIQFFQHDSSDEDGWTKLFDATEKAFGPVSTLVNNAGI-AVNKSVEETTTAEWRKLLAVNLDGVFFGTRLGIQRMKNKGLGASIINMSSIEGFVGDPSLGAYNASKGAVRIMSKSAALDCALKDYDVRVNTVHPGYIKTPLVDDLPGAEEAMSQRTKTPMGHIGEPNDIAYICVYLASNESKFATGSEFVVDGGY----------------
General information:
TITO was launched using:
RESULT:
Template:
1ZK4.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -179880 for 2044 contacts (-88.0/contact) +
2D Compatibility (PS) -25806 + (NN) -5904 + (LL) 1052
1D Compatibility (HY) -14800 + (ID) 4250
Total energy: -229588.0 ( -112.32 by residue)
QMean score : 0.570
(partial model without unconserved sides chains):
PDB file :
Tito_1ZK4.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1ZK4-query.scw
PDB file :
Tito_Scwrl_1ZK4.pdb
: