Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MLQRGAGQYFAGKRCFVTGAASGIGRATALRLAAQGAELYLTDRDRDGLAQTVCDARALGAQVPE-----HRVLDVSDYQDVAAFAADIHARHPSMDVVLNIAGVSAWGTVDQLTHDQWSRMVAINLMGPIHVIETLVPPMVAAGRGGHLVNVSSAAGLVGLPWHAAYSASKYGLRGLSEVLRFDLARHGIGVSVVVPGAVKTPLVNTVEIAGVDRDDPRVNRWVERFSGHAV----TPEKAADKILAGVTRNRYLVYTSADIRALYAFKRYAWWPYTLVMRRVNVFFTRALRPGP |
| 2D1Y Chain:B ((3-224)) | --------LFAGKGVLVTGGARGIGRAIAQAFAREGALVAL------------CDLRPEGKEVAEAIGGAFFQVDLEDERERVRFVEEAAYALGRVDVLVNNAAIAAPGSALTVRLPEWRRVLEVNLTAPMHLSALAAREMRKVG-GGAIVNVASVQGLFAEQENAAYNASKGGLVNLTRSLALDLAPLRIRVNAVAPGAIATEAV--LEAI-------RTRRDWEDL--HALRRLGKPEEVAEAVL------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2D1Y.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -154582 for 1717 contacts (-90.0/contact) +
2D Compatibility (PS) -21518 + (NN) 101 + (LL) 4836
1D Compatibility (HY) -10000 + (ID) 4000
Total energy: -185163.0 ( -107.84 by residue)
QMean score : 0.478
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