Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MPDRMRGVKSDSPEQESADDALKRIVDGFQHFRREVFPEQQALFKKLANSQRPRAMFITCADSRIVPELITQSSPGDLFVTRNVGNVVPPYGQM-NGGVSTAIEYAVLALGVHHIIVCGHSDCGAMRAVLDPQT--LERMPTVKAWLRHAEVARTVVADNCDCGASHDTLGVLTEENVVAQLDHLRTHPSVASRLASGQLFIHGWVYDIESAQIRAYDAKQGRFLPLDGEHPVPMATPAPRYLSS
1EKJ Chain:A ((12-221))
-------------------EASERIKTGFLHFKKEKYDKNPALYGELAKGQSPPFMVFACSDSRVCPSHVLDFQPGEAFVVRNVANLVPPYDQAKYAGTGAAIEYAVLHLKVSNIVVIGHSACGGIKGLLSFPFDGTYSTDFIEEWVKIGLPAKAKVKAQHGDAPFAELCTHCEKEAVNASLGNLLTYPFVREGLVNKTLALKGGYYDFVKGSFELWGLEFGLSSTFSV----------------
General information:
TITO was launched using:
RESULT:
Template:
1EKJ.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -112145 for 1519 contacts (-73.8/contact) +
2D Compatibility (PS) -22112 + (NN) -7689 + (LL) 1220
1D Compatibility (HY) -13600 + (ID) 3400
Total energy: -157726.0 ( -103.84 by residue)
QMean score : 0.439
(partial model without unconserved sides chains):
PDB file :
Tito_1EKJ.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1EKJ-query.scw
PDB file :
Tito_Scwrl_1EKJ.pdb
: