Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MSLLDIKNLSVRFG-DTTAVPVVDGLDLSVDKGEVLAIVGESGSGKSVTMMALMGLIDAPGWVSADHLRFDGHDMLTLKGRQRRRIVGKDMAMVFQDPMTALNPSYTVGYQIEEVLRLHLGLRGKALRQRALELLERVEIPAAASRLDAYPHQLSGGMSQRVAIAMAIAAEPKLLIADEPTTALDVTIQAQIMELLLNLQRDQDMALILITHDLAVVAETAQRVCVMYAGEAVEIGGVPALFDRPTHPYTEALIKAIPEHCAGEARLATLPG-------------IVPGRYDRPRGCLLSPRCPYAQEHCRQERPALETHERGAVRCFYPLNLLNEVA-------------- |
| 3TUZ Chain:H ((23-362)) | -HMIKLSNITKVFHQGTRTIQALNNVSLHVPAGQIYGVIGASGAGKS-TLIRCVNLLERP---TEGSVLVDGQELTTLSESELTKARRQ-IGMIFQHF--NLLSSRTVFGNVALPLELD-NTPKDEVKRRVTELLSLVGLG---DKHDSYPSNLSGGQKQRVAIARALASNPKVLLCDQATSALDPATTRSILELLKDINRRLGLTILLITHEMDVVKRICDCVAVISNGELIEQDTVSEVFSHPKTPLAQKFIQSTLHLDIPEDYQERLQAEPFTDCVPMLRLEFTGQSVDAPLLSETARRFNVNNNIISAQMDYAGGVKFGIMLTEMHGTQQDTQAAIAWLQEHHVKVEV |
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General information:
TITO was launched using:
| RESULT:
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Template: 3TUZ.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -218048 for 2398 contacts (-90.9/contact) +
2D Compatibility (PS) -34258 + (NN) -15381 + (LL) 1368
1D Compatibility (HY) -18000 + (ID) 4200
Total energy: -288519.0 ( -120.32 by residue)
QMean score : 0.447
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