Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MVQSLAKQVIHQAVEVNAQDIYIIPKGDCYELYMRIDDERRFIDVFEFNRMASLISHFKFVAGMNVGEKRRSQLGSCDYELSEGRLVSLRLSSVGDYRGQESLVIRILYSGHQDLKYWFDNIKQMKEVLGTRGLYLFSGPVGSGKTTLMYQLASEVFK--NKQIITIEDPVEIKNDK----MLQLQLNEDIGMTYDALIKLSLRHRPDILIIGEIRDQATARAVIRASLTGVMVFSTIHAKSISGVYDRLIELGVN------YQELENSLKLIAYQRLIGGGS-----LIDFETGNF----------------------KKHSSDKWNRQVDILAEEGHISKKQAQVEKIIPQETTESSPTF |
2EYU Chain:A ((10-249)) | ------------------------------------------------------------------------------------------------------------------KLGLPDK--VLELCHRKMGLILVTGPTGSGKSTTIASMIDYINQTKSYHIITIEDPIEYVFKHKKSIVNQREVGE-DTKSFADALRAALREDPDVIFVGEMRDLETVETALRAAETGHLVFGTLHTNTAIDTIHRIVDIFPLNQQEQVRIVLSFILQGIISQRLLPKIGGGRVLAYGLLIPNTAIRNLIRENKLQQVYSLMQSGQAETGMQTMNQTLYKLYKQGLITLEDAMEASPDPKELERMIR-- |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 2EYU.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -92552 for 1604 contacts (-57.7/contact) +
2D Compatibility (PS) -22110 + (NN) -10768 + (LL) 8916
1D Compatibility (HY) -6400 + (ID) 2650
Total energy: -125564.0 ( -78.28 by residue)
QMean score : 0.510
|
|
|