Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MEILIAGGSGFLGKQIIKAALTKGHKVAYLSRHEGKGDIF-------KDPRLTYIRGDITEADKIHLEDRTFDILIDCIGAIKPNQLDELNVKATQKAVALCHKN-QIPKLVYISANSG----------------------Y-SAYIKSKRKAEQIIKA----SGLDYLFVRPGLMYGEER-PL-SIFQAKCIKLFSHLP-FL-G-I----VVQKVFPTKVVIVAEAIVTTLRKKPTQKILSIEELNNK
2RH8 Chain:A ((10-263))
KTACVVGGTGFVASLLVKLLLQKGYAVNTTVRDPDNQKKVSHLLELQELGDLKIFRADLTDELSFEAPIAGCDFVFHVATPVHF---IKPAIQGVVNVMKACTRAKSVKRVILTSSAAAVTINQLDGTGLVVDEKNWTDIPPTWGYPASKTLAEKAAWKFAEENNIDLITVIPTLMAGSSLTSDVPSSIGLAMSLITGNEFLINGMKGMQMLSGSVSIAHVEDVCRAHIFVAEKESASGRYICCAANTS
General information:
TITO was launched using:
RESULT:
Template:
2RH8.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -117241 for 1584 contacts (-74.0/contact) +
2D Compatibility (PS) -20588 + (NN) -10693 + (LL) 216
1D Compatibility (HY) -6400 + (ID) 1750
Total energy: -156456.0 ( -98.77 by residue)
QMean score : 0.463
(partial model without unconserved sides chains):
PDB file :
Tito_2RH8.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2RH8-query.scw
PDB file :
Tito_Scwrl_2RH8.pdb
: