Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMKILMIEDNVSVCTMTEMFFFKEGFEAEFVHDGLEGYQRFTEENWDLIILDIMLPSMDGVTICRKIRE-TSTVPIIMLTAKDTESDQVIGFEMGADDYVTKPFSPLTLVARIKAVIRRYKATGKAVIDEDMIETECFTINKKTREVLLNGEPVENLTPKEFDLLYYLVQNPRQVFSREQLLEQVWGYQFYGDERTVDVHIKRLRKKLASEDKP-FLYTVWGVGYKFDED
1KGS Chain:A ((4-224))-RVLVVEDERDLADLITEALKKEMFTVDVCYDGEEGMYMALNEPFDVVILDIMLPVHDGWEILKSMRESGVNTPVLMLTALSDVEYRVKGLNMGADDYLPKPFDLRELIARVRALIRRKSESKS-----TKLVCGDLILDTATKKAYRGSK-EIDLTKKEYQILEYLVMNKNRVVTKEELQEHLW-----VFSDVLRSHIKNLRKKVDKGFKKKIIHTVRGIGYVARD-


General information:
TITO was launched using:
RESULT:

Template: 1KGS.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 990 -146521 -148.00 -684.68
target 2D structure prediction score : 0.68
Monomeric hydrophicity matching model chain A : 0.74

3D Compatibility (PKB) : -148.00
2D Compatibility (Sec. Struct. Predict.) : 0.68
1D Compatibility (Hydrophobicity) : 0.74
QMean score : 0.458

(partial model without unconserved sides chains):
PDB file : Tito_1KGS.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-1KGS-query.scw
PDB file : Tito_Scwrl_1KGS.pdb: