Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MVLRSLASPAALTDPKRCASVVGVAAFAVRREHAPDALGGPPGLPAPRGFRAAFAAAYAVAYLAGGERRMLRLIRRYG-PIMTMPILSLGDVAIVSDSALAKEVFTAPTDVLLGGE--GVGPAAAIYGSGSMFVQEEPEHLRRRKLLTPPLHGAALDRYVPIIENSTRAAMHTWPVDRPFAMLTVARSLMLDVIVKVIFGVDDPEEVRRLGRPFERLLNLGVSEQLTVRYALRRLGALRVWPARARANTEIDDVVMALIAQRRADPRLGERHDVLSLLVSARGESGEQLSDSEIRDDLITLVLAGHETTATTLAWAFDLLLHHPDALRRVRAEAVGGGEAFTTAVINETLRVRPPAPLTARVAAQPLTIGGYRVEAGTRIVVHIIAINRSAEVYEHPHEFRPERFLGTRPQTYAWVPFGGGV----KRCLGANFSMRELITVLHVLLREGEFTAVDDEPERIVRRSIMLVPRRGTRVRFRPAR |
| 1IZO Chain:A ((6-416)) | -----------------------------------------PHDKS--LDNSLT-------LLKEGYLFIKNRTERYNSDLFQARLLG-KNFICMTGAEAAKVFYDTDR--FQRQNALPKRVQKSLFGVNAIQGMDGSAHIHRKMLFLSLMTPPHQKRLAELMTEEWKAAVTRWEKADEVVLFEEAKEILCRVACYW-AGVPLKE--TEVKERADDFIDMVDAF---G-AV------GPRHWKGRRARPRAEEWIEVMIEDARAGLLKTTSGTALHEMAFHTQEDGSQLDSRMAAIEL-INVLRPIVAISYFLVFSALALHEHPKYKEWLRSGNS----REREMFVQEVRRYYPFGPFLGALVKKDFVWNNCEFKKGTSVLLDLYGTNHDPRLWDHPDEFRPERFAEREENLFDMIPQGGGHAEKGHRCPGEGITIEVMKASLDFLVHQIEYDVPEQSL-HYSLARMPSLPESGFVMSGIRRK |
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General information:
TITO was launched using:
| RESULT:
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Template: 1IZO.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -254772 for 3345 contacts (-76.2/contact) +
2D Compatibility (PS) -43928 + (NN) -25557 + (LL) 5332
1D Compatibility (HY) -14400 + (ID) 3350
Total energy: -336675.0 ( -100.65 by residue)
QMean score : 0.417
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