Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMMNTDETIFALSTVFGKSGVAVIRISGNHALKALNHFHVNKDMKPRFATLVDLYDSSDQLIDNGIAIYFPAPNSFTGEDVIELQVHGGKAVIKIVLEELSRIFVMAKPGEFLLRAFLNGKFDLTQIEGIADLIDAETKMQAKQAIKQMSGELEKLYSSWRQRLIAVQSKIEAYIDFPEDVATEKNELEKINDEVQTLVQSIQEHLNDNRRGERLREGLHIVITGEPNVGKSTLFNFLARRDIAIVSEYVGTTRDILEAHIDIGGYPIILSDTAGIRESSDPVESEGISRAKKRSCEADLRIELFPFEQRYNINCNV-------ISSNTIYVLSKADDVINDHDI----KISDIDFLPVSILKGIGTEKLVSVIKEKVEEKFVYDRDVPVITRQRHRNCMQKAIEHLRRFNMNNPIELVSEDLRLAASELGVVTGIINVEEVLDDIFNNFCVGK
2DYK Chain:A ((2-160))-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------HKVVIVGRPNVGKSSLFNRLLKKRS-----------DLKEGVVETDRGRFLLVDTGGLWSGDKW-EKKIQEKVDRALEDAEVVLFAVDGRAELTQADYEVAEYLRRKGKPVILVATKVDDPKHELYLGPLYGLGFGDPIPTSSEHARGLEELLEAIWERLP---------------------------------------------------------------------------


General information:
TITO was launched using:
RESULT:

Template: 2DYK.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -72058 for 1032 contacts (-69.8/contact) +
2D Compatibility (PS) -14451 + (NN) -4436 + (LL) 23672
1D Compatibility (HY) -1200 + (ID) 1700
Total energy: -70173.0 ( -68.00 by residue)
QMean score : 0.452

(partial model without unconserved sides chains):
PDB file : Tito_2DYK.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-2DYK-query.scw
PDB file : Tito_Scwrl_2DYK.pdb: