Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MMNTDETIFALSTVFGKSGVAVIRISGNHALKALNHFHVNKDMKPRFATLVDLYDSSDQLIDNGIAIYFPAPNSFTGEDVIELQVHGGKAVIKIVLEELSRIFVMAKPGEFLLRAFLNGKFDLTQIEGIADLIDAETKMQAKQAIKQMSGELEKLYSSWRQRLIAVQSKIEAYIDFPEDVATEKNELEKINDEVQTLVQSIQEHLNDNRRGERLREGLHIVITGEPNVGKSTLFNFLARRDIAIVSEYVGTTRDILEAHIDIGGYPIILSDTAGIRESSDPVESEGISRAKKRSCEADLRIELFPFEQRYNINCNV-------ISSNTIYVLSKADDVINDHDI----KISDIDFLPVSILKGIGTEKLVSVIKEKVEEKFVYDRDVPVITRQRHRNCMQKAIEHLRRFNMNNPIELVSEDLRLAASELGVVTGIINVEEVLDDIFNNFCVGK |
2DYK Chain:A ((2-160)) | -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------HKVVIVGRPNVGKSSLFNRLLKKRS-----------DLKEGVVETDRGRFLLVDTGGLWSGDKW-EKKIQEKVDRALEDAEVVLFAVDGRAELTQADYEVAEYLRRKGKPVILVATKVDDPKHELYLGPLYGLGFGDPIPTSSEHARGLEELLEAIWERLP--------------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2DYK.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -72058 for 1032 contacts (-69.8/contact) +
2D Compatibility (PS) -14451 + (NN) -4436 + (LL) 23672
1D Compatibility (HY) -1200 + (ID) 1700
Total energy: -70173.0 ( -68.00 by residue)
QMean score : 0.452
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