Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MKNAKRKVVIYIKQYCPFCKRAKE-LLDEKGVKYEEIDVF------KNSDLFSNIKLKYNVRTVPQIFIADKNGNYVHHIAGCDKLMDLEREGKLDDMLSTNYDKTDVTTYTSNSDEYEEYVASHDDFM
3C1R Chain:A ((22-115))
--IAENEIFVASKTYCPYCHAALNTLFEKLKVPRSKVLVLQLNDMKEGADIQAALYEINGQRTVPNIYINGK------HIGGNDDLQELRETGELEELLEPILA-------------------------
General information:
TITO was launched using:
RESULT:
Template:
3C1R.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -55256 for 596 contacts (-92.7/contact) +
2D Compatibility (PS) -9644 + (NN) -4469 + (LL) 1248
1D Compatibility (HY) -6400 + (ID) 1350
Total energy: -75871.0 ( -127.30 by residue)
QMean score : 0.657
(partial model without unconserved sides chains):
PDB file :
Tito_3C1R.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3C1R-query.scw
PDB file :
Tito_Scwrl_3C1R.pdb
: