Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MNINNRIGIYPGTFDPITFGHIDIIKRACKLVDRLIIGVAENINKH-TTFDAKLRTSMAENEIKRLEIDVDVVSFNGLLVKFAKEQNASVIIRGLRAVSDFDYEFQMSWVNYKLLPEIETIFLPASEDTQFISSSFVKEIARLGESVSKFVSVGVQKELINLNRIGSE
1OD6 Chain:A ((1-159))
-----MHVVYPGSFDPLTNGHLDVIQRASRLFEKVTVAVLEN----QYLFSAEERLAIIREATAHL-ANVEAATFSGLLVDFVRRVGAQAIVKGLRAVSDYEYELQMAHLNRQLYPGLETLFILAATRYSFVSSTMVKEIARYGGDVSKLVPPATLRALKAKLGQ---
General information:
TITO was launched using:
RESULT:
Template:
1OD6.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -114747 for 1213 contacts (-94.6/contact) +
2D Compatibility (PS) -16386 + (NN) -6041 + (LL) 512
1D Compatibility (HY) -12000 + (ID) 3150
Total energy: -151812.0 ( -125.15 by residue)
QMean score : 0.472
(partial model without unconserved sides chains):
PDB file :
Tito_1OD6.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1OD6-query.scw
PDB file :
Tito_Scwrl_1OD6.pdb
: