Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
------------MAYKIDDKQDQRLVNDTLNQIDIPEGYILHSD---QGSVYTSYAYYQLCEEKGIIRSMSRKGTPADNAPIESFHSSLKSETLYINNQLNSSNHIVIDIVEKYIKNYNNNQIQQKLGYLSPVKYRELIA---
1C20 Chain:A ((3-130))
GWSFEEQFKQVRQLYEINDDPKRKEFLDDLFSFMQKRGTPINRLPIMAKSVLDLYELYNLVIARGGLVDVINKK------LWQEIIKGLH-----LPSSITSAAFTLRTQYMKYLYPYECEKK----NLSTPAELQAAIDGNR
General information:
TITO was launched using:
RESULT:
Template:
1C20.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -29003 for 675 contacts (-43.0/contact) +
2D Compatibility (PS) -11364 + (NN) -629 + (LL) 920
1D Compatibility (HY) -6000 + (ID) 1000
Total energy: -47076.0 ( -69.74 by residue)
QMean score : 0.426
(partial model without unconserved sides chains):
PDB file :
Tito_1C20.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1C20-query.scw
PDB file :
Tito_Scwrl_1C20.pdb
: