Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MSQAVKVERRETLKQKPNTSQLGFGKYFTDYMLSYDYDADKGWHDLKIVPYGPIEISPAAQGVHYGQSVFEGLKAYKR-DGEVALFRPEENFKRLNNSLARLEMPQ-VDEAELLEGLKQLVDIERDWIPEGEGQSLYIRPFVFATEGALGVGAS--HQYKLLIILSPSGAYYGGETLKPTKIYVEDEYVRAVR-GGVGFAKVAGNYAASLLAQTNANKLGYDQVLWLDGVEQKYIEEVGSMNIFFVENGKVITPELNGSILPGITRKSIIELAKNLGYEVEERRVSIDELFESYDKGELTEVFGSGTAAVISPVGTLRYEDREIVINNNETGEITQKLYDVYTGIQNGTLEDKNGWRVVVPKY |
| 2EIY Chain:A ((2-306)) | -----------------------------------QIKAGLIWMNGAFVPQEEAKTSVLSHALHYGTSVFEGIRAYETAKGP-AIFRLKEHVKRFYNSAKVLRMEIPFAPEELEEAIKEVVRRNG-------YRSCYIRPLAWMGAKALGVNPLPNNPAEVMVAAWEW-------VRKGARLITSS-WARFPANVMPGKAKVGGNYVNSALAKMEAVAAGADEALLLDEE--GYVAEGSGENLFFVRDGVIYALEHS-VNLEGITRDSVIRIAKDLGYEVQVVRATRDQLYM------ADEVFMTGTAAEVTPVSMIDWR----PIGKGTAGPVALRLREVYLEAVTGRRPEYEGWLTYVN-- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2EIY.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -148155 for 2479 contacts (-59.8/contact) +
2D Compatibility (PS) -31719 + (NN) -12165 + (LL) 3384
1D Compatibility (HY) -14800 + (ID) 5050
Total energy: -208505.0 ( -84.11 by residue)
QMean score : 0.554
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