Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MKLKSFITVTLALGMIATTGATVTSNEVSAAEKDKLPATQKAKEMQNVPYTIAVDGIMAFNQSYLNLPKDSQLSYLDLGNKVKALLYDERGVTPEKIRNAKSAVYTITWKDGSKKEVDLKKD---SYTANLFDSNSIKQIDINVKTK
3R2I Chain:A ((153-232))
--------------------------------------------------------------NELFFIQKEEVSLKELDFKIRKLLIEKYRLYKGT---SDKGRIVINMKDEKKHEIDLSEKLSFERMFDVMDSKQIKNIEVNLN--
General information:
TITO was launched using:
RESULT:
Template:
3R2I.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -4362 for 454 contacts (-9.6/contact) +
2D Compatibility (PS) -8235 + (NN) -2519 + (LL) 5504
1D Compatibility (HY) -6800 + (ID) 950
Total energy: -17362.0 ( -38.24 by residue)
QMean score : 0.435
(partial model without unconserved sides chains):
PDB file :
Tito_3R2I.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3R2I-query.scw
PDB file :
Tito_Scwrl_3R2I.pdb
: