Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MKINTTGGQIHGITQ----DGLDIFLGIPYAEPPVHDNRFKHSTLKTQWSEPIDATEIQPIPPQPDNKLEDFFS---SQSTTFTEHEDCLYLNIWKQHNDQTKKPVIIYFYGGSFENGHGTAELYQPAHLVQNNDIIVITCNYRLGALGYLDWSYFNKDFHSNNGLSDQINVIKWVHQFIESFGGDANNITLMGQSAGSMSILTLLKIPDIEPYFHKVVLLSGALRLD-T---LKSARNKAQYFQKMMRD-Y----LDTDDVTSLSTDDILMLMAKLKQSRGPSKGLDLIYAP-IKTDYIQND--------YPTTKPIFACYTKDEGDIYITSEQK--------KLSPQRFIDIME-LN--------D--IPLKYEDV---QTAK-QQSLAITHCYFKQPMKQFLQHLNIQDSN-AQLWLAEFAWHDTS--SAHYRSAYHILDMVFWFGNLQILAAHQYPTTAHLKFLSRQMQNDLANFAKSGKM--------PWPMYHNERRYYRTYQ |
| 1P0I Chain:A ((4-504)) | IIIATKNGKVRGMQLTVFGGTVTAFLGIPYAQPPLGRLRFKKPQSLTKWSDIWNATKYANSCCQNIDQSFPGFHGSEMWNPNTDLSEDCLYLNVWIPAPKPKNATVLIWIYGGGFQTGTSSLHVYDGKFLARVERVIVVSMNYRVGALGFLALPGNPEAP-GNMGLFDQQLALQWVQKNIAAFGGNPKSVTLFGESAGAASVSLHLLSPGSHSLFTRAILQSGSFNAPWAVTSLYEARNRTLNLAKLTGCSRENETEIIKCLRNKDPQEILLNEAFVVPYG---TPLSVNFGPTVDGDFLTDMPDILLELGQFKKTQILVGVNKDEGTAFLVYGAPGFSKDNNSIITRKEFQEGLKIFFPGVSEFGKESILFHYTDWVQRPENYREALGDVVGDYNFICPALEFTKKFS---EWGNNAFFYYFEHRSSKLPWPEWMGVMHGYEIEFVFGLPLERR---D-YTKAEEILSRSIVKRWANFAKYGNPQETQNQSTSWPVFKSTEQKYLTLN |
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General information:
TITO was launched using:
| RESULT:
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Template: 1P0I.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -209340 for 3857 contacts (-54.3/contact) +
2D Compatibility (PS) -46442 + (NN) -15064 + (LL) 120
1D Compatibility (HY) -22800 + (ID) 5700
Total energy: -299226.0 ( -77.58 by residue)
QMean score : 0.458
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