Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MERNEVLKKVEAAMPNARFKHTLGVEKAAVELAEHYHMDV----EKARITALLHDYAKYYDDDKARKIIEDEGYDPRLLSFHHSLWHAPVGAYLAEKEF-GITDTEILEAIRLHTTGS----A------TMSDFDKLIYLADYTEQGRTFPGVYKARRLALKSLDEAMLFALSNTITHLVKKQQLVFPDTLDAYNYFVNLNLEGDY |
| 3TM8 Chain:A ((164-289)) | --------------DKTISHHGVTVSTLSIALAQKLGITDPKKTQLLTLGALLHDYGHHHSPLNLNQPLDS----MSPEDLALWKKHPIEGAQKVQD-KKHFD-QTVINIIGQHEETINGTGPKGLREKDMDPLAVLVSSANAMDR------------------------------------------------------------ |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 3TM8.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -26580 for 814 contacts (-32.7/contact) +
2D Compatibility (PS) -11773 + (NN) -6277 + (LL) 6036
1D Compatibility (HY) -1200 + (ID) 900
Total energy: -40694.0 ( -49.99 by residue)
QMean score : 0.392
|
|
|