Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | VNKLVLIDGNSIANRAFYALPLLNNDKGVYTNAVYGFAMMLMNVLEKEKPSHVLVAFDAGKTTFRHTTFKGYKGGRQKTPSELSEQFPFIRELLTAYDIPQYELANYEADDIIGTLTKKAEADGMEVAIITGDRDLTQLASEKTTVYITKKGIADMETNTPETLKEKYNLTPEQIIDMKGLMGDSSDNIPGIPGVGEKTALKLLHEFGGTVESVLEHAEEISGKKLKEKVLENKELAILSKELATINVDSPIECTVESTKYDGYQTEKVIPLLKEMNFTTLLKNIEGDTPEESKELKELSFEIVTELKEQHFGGKTALYVELENDNYHTANFIGLTVHSSQGTYFFTKETAESSEAFRKWVESDQTKVVYD-AKKTIVAMNRIGLAISGITFDIMLASYLLNPSD---SIDDFTSVAVRHDYTEVE---TDEAVYGKGAKRSTPEESIVAAHLARKAVAIADLEKRLVDDLEKNEQLALMEDLELPLTFVLAEMEMQGVSVDTDRLEDMKVELGGRLKTLEASIHSLAGEEFNINSPKQLGVILFEKLELPPVKKTKTGYSTAADVLESLSGKHAIIDEILLYRQLGKIQSTYIEGLLKVTDKETHKVHTRF---NQTLTQTGRLSSVDPNLQNIPIRLEEGR------KIRQVFVPSKPGWKMFSADYSQVELRVLAHISEDENLIYAFKHDYDIHTKTAMDVFHVEKEEVDSLMRRQAKAVNFGIVYGISDYGLSQNLGITRKEAKDFIDRYFVSYPAVKEYMQDIVRFAKEKGYVETILHRRRYIPEIVSRNFNVRGFAERTAMNTPIQGSAADIIKKAMILMSERLVS--------EKLEAKLL-----------LQVHDELIFEAPEAEIAKLEEIVPDVMENAVELSVPLKVDSAFGDTWYDAK---- |
| 4X0Q Chain:A ((6-772)) | --SLSIID----------------------------------------------------------------------VASDQNLFQTFIKEWRC---------------------------------------------KKRFSISLACEKIRD------------------------------DTLVVG--------------------------------------------LAVC------------------------------------------------------------------------WGGRDAYYFSLLDPSLT-----------------LKDRMWYLQSCLRKESDKECSVVIYDFIQSYKILLLSCGISLEQSYEDPKVACWLLDPDSQEPTLHSIVTSFLPHELPLLEGMETSQGIQSLGLNAGSEHSG--RYRASVESILIFNSMNQLNSLLQKENLQDVFRKVEMPSQYCLALLELNGIGFSTAECESQKHIMQAKLDAIETQAYQLAGHSFSFTSSDDIAEVLFLELKLPP------QFSTSKDVLNKLKALHPLPGLILEWRRITNAITKVVFPLQREKCLNPFLGMERIYPVSQSHTATGRITFTEPNIQNVPRDFEIKMGMPFSISMRHAFVPF-PGGSILAADYSQLELRILAHLSHDRRLIQVLNTGADVFRSIAAEWKMIEPESVGDDLRQQAKQICYGIIYGMGAKSLGEQMGIKENDAACYIDSFKSRYTGINQFMTETVKNCKRDGFVQTILGRRRYLPGIKDNNPYRKAHAERQAINTIVQGSAADIVKIATVNIQKQLETFHSTFKSHGHREGMLQSDCPIRGGFFILQLHDELLYEVAEEDVVQVAQIVKNEMESAVKLSVKLKVKVKIGASWGELKDFDV |
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General information:
TITO was launched using:
| RESULT:
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Template: 4X0Q.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -191970 for 4516 contacts (-42.5/contact) +
2D Compatibility (PS) -62824 + (NN) -19896 + (LL) 19372
1D Compatibility (HY) -38800 + (ID) 8900
Total energy: -303018.0 ( -67.10 by residue)
QMean score : 0.435
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