Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MKKILLSLFTALLITFGGMTSIQADEYLRVGMEAAYAPFNWTQNDNTNGAVPIEGTDQYANGYDVQVAKKLAKKLNKKVVVVKTKWEGLVPALTSGKLDMIIAGMSPTEERKKEINFSKPYYISEPTLVVNAEGKYTNAKNISDFK--NAKVTAQQGVYLYNLIDQ-INGVKKEVAMGDFNQLRQAVESGVVDAYVSERPDATSAQTANPKLKMI-ELHQGFKTSDADTNISVGMRKGDN-RINQVNQVLESISRDK-QIALMDKMIKEQPSVKKEKNGKPNFFEQMATILKNNGSQFLRGTATTLLISMVGTIVGLFIGLLIGVFRTAPKSDNKLKAALQKLLGWLLNIYIEVFRGTPMIVQSMVIYYGTAQAFGVSLDRTLAAIFIVSINTGAYMSEIVRGGIFSVDKGQFEAATALGFTHGQTMRKIVLPQVVRNILPATGNEFVINIKDTSVLNVISVVELYFSGNTVATQTYQYFQTFTIIAIIYFILTFTVTRILRYIEKRFDSDNYTTGANQLQV |
| 3KBR Chain:A ((8-236)) | ------------------LDRILESGVLRVATTGDYKPFSYRT-EE----------GGYA-GFDVDMAQRLAESLGAKLVVVPTSWPNLMRDFADDRFDIAMSGISINLERQRQAYFSIPYLRDGKTPITLCSE-EARFQTLEQIDQPGVTAIVNPGGTNEKFARANLK-KARILVHPDNVTIFQQIVDGKADLMMTDAIEARLQSRLHPELCAVHPQP-----F-DFAEKAYLLPRD-EAFKRYVDQWLHIAEQSGLLRQRMEHWL--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3KBR.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -85770 for 1765 contacts (-48.6/contact) +
2D Compatibility (PS) -24087 + (NN) -3299 + (LL) 22084
1D Compatibility (HY) -9600 + (ID) 2250
Total energy: -102922.0 ( -58.31 by residue)
QMean score : 0.477
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