Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MSKELSPKYNPAEVEEGRYQTWLDQDVFKPSGDTEAKPYSIVIP-PPNVTGKLHLGHAWDTTLQDIIIRQKRMQGFDTLWLPGMDHAGIATQAKVEERLREQGISRYDLGREKFLDKVWEWKDEYAATIKSQWGKMGLSVDYSRERFTLDEGLSKAVRKVFVDLYNKGWIYRGEFIINWDPAARTALSDIEVIH-------------------------------------------KDVEGAF------YHMNYMLEDGSRALEVATTRPETMFGDVAVAVNPEDPRYKDL-----------------------------------IGQNVILPIINKPIPIIADEHADPEFGTGVVKITPAHDPNDFAVGQRHNLPQVNVM---------------NDDGTMNELADEFNGMDRFEARKAVVAKLESLGNLVKIEK---------------MTHSVGHSERTGVVVEPRLSTQWFVKMDQ------------LAKNAIANQDTEDKVEFYPPRFNDTFMSWMENVHDWVISR--------QLWWGHQIPAWYNVNGEMYVGEDAPEGDGWTQDEDVLDTWFSSALW---------PFSTMGWPDTEAADFKRYFPTSTLVTGYDIIFFWVSRMI-------FQSLEFTGRQPFSNVLIHGLIRDEEGRKMSKSLGNGIDPMDVIEKYGADALRWFLSNGSAPGQDVRFSYEKMDASWNFINKIWNISRYILMNNEGLTLDQARENVEKVVNSQVGNVTDRWILHNLNETVGKVTESFDKFEFGVAGHILYNFIWEEFANWYVELTKEVLYSDNEDEKVVTRSVLLYTLDQILRLLHPIMPFVTEEIFGQYAEGSIVLASYPQVNATFENQTAHKGVESLKDLIRSVRNSRAEVNVAPSKPITILVKTSDSELESFFKDNSNYIKRFTNPETLEISSAITAPELAMTSIITGAEIFLPLADLLNVEEELARLEKELAKWQKELNMVGKKLSNERFVANAKPEVVQKEKDKQTDYQTKYDATIARIEEMKKLNND |
| 2BYT Chain:A ((1-876)) | -----MEKYNPHAIEAKWQRFWEEKGFMKAKDLPGGRGKQYVLVMFPYPSGDLHMGHLKNYTMGDVLARFRRMQGYEVLHPMGWDAFGLPAENAALKFGV----------------HPKDWTYANIRQAKESLRLMGILYDWDREVTTCEPEYYRWNQWIFLKMWEKGLAYRAKGLVNWCPKCQTVLANEQVVEGRCWRHEDTPVEKRELEQWYLRITAYAERLLKDLEGLNWPEKVKAMQRAWIGRSEGAEILFPVEGKEVRIPVFTTRPDTLFGATFLVLAPEHPLTLELAAPEKREEVLAYVEAAKRKTEIERQAEGREKTGVFLGAYALNPATGERIPIWTADYVLFGYGTGAIMAVPAHDQRDYEFARKFGLPIKKVIERPGEPLPEPLERAYEEPGIMVN-SGPFDGTESEEGKRKVIAWLEEKGLGKGRVTYRLRDWLISRQRYWGTPIPMVHCEACGVVPVPEEELPVLLPDLKDVEDIRPKGKSPLEAHPEFYETTCPKCGGPAKRDTDTMDTFFDSS--WYYLRYTDPHNDRLPFDPEKANAWMPVD--QYIG-----GVEHAVLHLLYSRFFTKFLHDLGMVKVEEPFQGL---FTQGMVLAWTDFGPVEVEGSVVRLPEPTRIRLEIPESALSLEDVRKMGAELRPHEDGTLHLWKPAVMSKSKGNGVMVGPFVKEQGADIARITILFAAPPENEMVWTEEGVQGAWRFLNRIYRRVAEDREALLETSGVFQAEALEG---------KDRELYGKLHETLKKVTEDLEALRFNTAIAALMEFLNALYEY---------------RKDRPVTPVYRTAIRYYLQMLFPFAPHLAEELWHWFWPDSLFEAGWPELDEKA----------------------------LEKDVVEVAVQVNGRVRG-----------------TIHIPKDAPLEVARAEA---------------------------LKVRNVRAHLEGKEVVKEIYVPGKILNLVV----------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2BYT.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -164820 for 5676 contacts (-29.0/contact) +
2D Compatibility (PS) -75692 + (NN) -14507 + (LL) 10624
1D Compatibility (HY) -23600 + (ID) 8250
Total energy: -276245.0 ( -48.67 by residue)
QMean score : 0.299
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