Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MSKVAIVTGAGQGIGFAIAKRLHADGFKIGVLDYNEETAQAAVDKL-S--PEDAVAVVADVSKRDQVFDAFQKVVDTFGDLNVVVNNAGVAPT---TPLDTITEEQFEKAFAINVGGTIWGSQAAQKHFRELGHGGKIINATSQAGCEGNPNLTVYGGTKFAVRGITQTLAKDLASEGITVNAYAPGIVKTPMMFDIAHEVGKNAGKDDEWGMEQFAKDITLKRLSEPEDVANAVGFLAGDDSNYITGQTIVVDGGMVFH |
| 2CFC Chain:A ((1-249)) | MSRVAIVTGASSGNGLAIATRFLARGDRVAALDLSAETLEETARTHWHAYADKVLRVRADVADEGDVNAAIAATMEQFGAIDVLVNNAGITGNSEAGVLHTTPVEQFDKVMAVNVRGIFLGCRAVLPHMLLQG-AGVIVNIASVASLVAFPGRSAYTTSKGAVLQLTKSVAVDYAGSGIRCNAVCPGMIETPMTQWRLDQ-P--------ELRDQVLARIPQKEIGTAAQVADAVMFLAGEDATYVNGAALVMDGAYTAI |
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General information:
TITO was launched using:
| RESULT:
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Template: 2CFC.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -110554 for 2107 contacts (-52.5/contact) +
2D Compatibility (PS) -26097 + (NN) -7863 + (LL) 208
1D Compatibility (HY) -14400 + (ID) 4450
Total energy: -163156.0 ( -77.44 by residue)
QMean score : 0.643
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