Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MEQTFFMIKPDGVKRGFIGEVISRIERRGFSIDRLEVRHADADILKRHYAELTDRPFFPTLVDYMTSGPVIIEVISGEEVISTWRTMMGSTNPKDALPGTIRGDFAQAPSPNQATCNIVHGSDSPESATREIAIWFNN
1WKJ Chain:A ((1-133))
MERTFVMIKPDGVRRGLVGEILARFERKGFRIAALKLMQISQELAERHYAEHREKPFFPGLVRFITSGPVVAMVLEGPGVVAEVRKMMGATHPKDALPGTIRGDFATT-----IDENVIHGSATLEDAQREIALFFRP
General information:
TITO was launched using:
RESULT:
Template:
1WKJ.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -75518 for 1005 contacts (-75.1/contact) +
2D Compatibility (PS) -14047 + (NN) -3778 + (LL) -268
1D Compatibility (HY) -14800 + (ID) 3550
Total energy: -111961.0 ( -111.40 by residue)
QMean score : 0.582
(partial model without unconserved sides chains):
PDB file :
Tito_1WKJ.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1WKJ-query.scw
PDB file :
Tito_Scwrl_1WKJ.pdb
: